Hannah Heil

🚨 New EMBO Practical Course!
Ultrastructure Expansion Microscopy: From Cells to Tissue 🔬
📅 20–24 Apr 2026 | 📍 EMBL Heidelberg
Co-organised with @banterlegroup.bsky.social @gautamdey.bsky.social

💡 Register your interest to get notified when registration opens:

🔗 www.embl.org/about/info/c...

🚨Scaling multiplexed imaging 📈 We are excited to share Pathology-oriented multiPlexing (PathoPlex). Now out in @nature.com: www.nature.com/articles/s41...

🧵Walk-through thread below ⬇️

Do you like developing new AI vision methods for microscopy image analysis? You love theory & implementation? 1 week left to apply for a fully funded PhD position in our lab in Dresden 🇩🇪! Topics: object detection/tracking, multimodal models & more. DM/email for details! #PhD #AcademicJobs #GPUsgoBrr

🚨 Important detail in the #ExM & #eSRRF protocol: #eSRRF is not only available as plugin in #ImageJ /Fiji 🌴, #NanoPyx also brings it into the #python world 🐍: doi.org/10.1038/s415...
How to get started? Check out the training manual: doi.org/10.5281/zeno...

🧾New paper now on ‪‪‪‪Nature Protocols ‬🎉The #ExSRRF protocol gives you all details on how to merge Expansion Microscopy technique with #eSSRF analysis. Developed by Dominik Kylies, @puellesv.bsky.social and @hannah-superres.bsky.social, @henriqueslab.bsky.social

🔗: www.nature.com/articles/s41...

👇Check it out! 🔬🧫🏄‍♀️🌊

It's here! ✨
The #ExSRRF protocol paper is out 😍. Full details for merging Expansion Microscopy with our eSRRF analysis. From cells to tissue. A partnership with @puellesv.bsky.social's lab. Lead by Dominik Kylies and @hannah-superres.bsky.social + colleagues. #ExM #eSRRF
➡️ Open link: rdcu.be/euvEw

Excited to share our protocols paper on combining expansion microscopy with super-resolution algorithms! #ExM #ExSRRF

a group of power rangers standing next to each other with the words `` super team '' above them . ALT: a group of power rangers standing next to each other with the words `` super team '' above them .

This work was a true team effort 💪
👥 Dominik Kylies, @agvesga.bsky.social , @mariodelr.bsky.social, Maria Schwerk, @maltekuehl.com‬, Milagros N. Wong, @puellesv.bsky.social & @henriqueslab.bsky.social
Your creativity, precision, and persistence brought this to life. 🙌

And there is an extra training manual on eSRRF processing 🏋️https://zenodo.org/doi/10.5281/zenodo.11518140

🧐 How can I make sure my sample expands properly and how do I find the right eSRRF processing parameters?
Here you will find all the nitty-gritty details on #ExM sample preparation, 🔬 & #eSRRF processing 🏄, common pitfalls 🪨 and troubleshooting advice🛠️.

🚨 #ExM meets #eSRRF 🔬🏄🌊 the full protocol now in ‪@natprot.nature.com‬: doi.org/10.1038/s415...

YouTube video by LIBRE hub Open Hardware Microfluidics

A few weeks ago, I gave an overview talk on our efforts in making Open Hardware Microfluidics.
The talk is now online here:
www.youtube.com/watch?v=DP6L...

Thanks to @makertobey.bsky.social @ LibreHub for the invitation :)

🔬👨‍💻📰 #SReD is out!
Automated structural detection for #ImageJ & #FIJI, from nano to macro ✨🐘. No training data, no bias - texture analysis with GPU acceleration!⚡️
Brainchild of @afonsomendes92.bsky.social and adventure w @christlet.bsky.social lab + friends.

Check: www.nature.com/articles/s41...

If you would like to be selected as a speaker from the abstracts, please use your chance until the end of the week to submit! 👇

🧑‍🔬📰🚀 #RxivMaker is here! A framework automating the creation of publication-ready scientific #preprints from simple Markdown. Goodbye manual formatting, and hello gorgeous manuscripts! A great adventure with @guijacquemet.bsky.social's lab

📜: zenodo.org/records/1575...
👨‍💻: github.com/HenriquesLab...

YouTube video by Cytely How AI Is Revolutionizing Microscopy

Thank you for sharing Hannah! We caught a bug that happened during upload, video is republished under: youtu.be/0pV8wwa3clI?...

YouTube video by Cytely How AI Is Revolutionizing Microscopy

This might be the first ever Smart Microscopy documentary filmed, with leading voices across the industry.

We made it to drive awareness of this paradigm shift and its potential impact.

MVPs:
@pnordenfelt.bsky.social

@hannah-superres.bsky.social

youtu.be/0pV8wwa3clI

🙌 It was great to contribute this and I’m looking forward to see how #SmartMicroscopy will make bioimaging faster, smarter and more reproducible! 🔬🦠

Are you looking for a postdoc?
I will be looking for 2-4 people after the summer to join the lab !!
Do not hesitate to reach out and disseminate !!

Our paper is now published! The first encounter of a forming organism with bacteria reveals that innate immunity initiates in epithelial cells of early embryos, even in humans. www.cell.com/cell-host-mi...
made in @ibmb-csic.bsky.social @csic.es @idibell.bsky.social 1/9

Welcome to the youngSMLMS, a pre-SMLMS event for students, PhDs & PostDocs!
We’ll explore science & career in workshops, talks, roundtables, a panel and with time to network.
--> Thanks to our sponsors, youngSMLMS is free & we cover accommodation for all presenting their work. Thus, register now!

Special Issue: In Vitro Models of Human Disease to Inform Mechanism and Drug Discovery Edited by Vivian Li, Austin Smith and Joseph Wu Submission deadline: 6 October 2025

Call for papers

Disease Models & Mechanisms (DMM) invites you to submit your latest research to their upcoming special issue: In Vitro Models of Human Disease to Inform Mechanism and Drug Discovery.

Find out more: journals.biologists.com/dmm/pages/in...

#Research #CallForPapers #Disease #Science

Excited to give a talk next week at EMBO SRLM all about expansion microscopy! #expansionmicroscopy #ExM #EMBO

I‘m already on my way to Prag for @embo.org #SLM2025 #Super-resolution practical course! Looking forward to contribute with live-cell #eSRRF 🏄‍♀️ , meet some familiar faces and many new ones 🤩. Here some impressions from the 🚂: Öresund, Berlin, Dresden & the Bastei.

Is Pursuing a PhD Right for You? - Dr. Ulrike Boehm Deciding to pursue a PhD can feel like standing at a crossroads, where paths lead to both adventure and uncertainty...

💡 Deciding to pursue a PhD can feel like standing at a crossroads, where paths lead to both adventure and uncertainty. This choice is complex, and it’s crucial to weigh the pros and cons carefully. Let’s explore the intricacies of pursuing a PhD! 👉 ulrikeboehm.org/is-pursuing-...

Researcher Positions Currently, the Finnish Cancer Institute has nine researcher positions funded by the Cancer Foundation Finland and the K. Albin Johansson Foundation. The Finnish Cancer Institute handles the selection ...

Delighted to share that I will start a five-year K. Albin Johansson Research Professorship next year. I am deeply honored to have been selected for this position. Many thanks to the Finnish Cancer Institute and the K. Albin Johansson Foundation 🙏
www.syopainstituutti.com/researcher-p...

See you very soon there!!😍 Who's attending this year?

👉🏻 so glad to see this work out now ... a masterpiece conceived, led and driven by 👉🏻 Christoph Spahn 👏@michriscopy.bsky.social (🚨 #NewPI) and with great collaborations 🙏 @henriqueslab.bsky.social @seamusholden.bsky.social @gomez-mariscal.bsky.social

Last week, the Latin American Hub for Bioimaging Through Open Hardware kindly invited me to speak about our 3D printing work to researchers across Latin America. Great to see so much engagement & positivity about the work. Really great to hear about other research in the #OpenMicroscopy space. 🔬