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Tatsuya Tsukui

@tatsuyatsukui.bsky.social

Assistant Professor at UCSF. Studying Pulmonary fibrosis | Fibroblast | Tissue injury and remodeling | Immunology

27 Followers  |  39 Following  |  5 Posts  |  Joined: 08.02.2025  |  1.5488

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We also highlighted some recent findings regarding stromal cells induced in injury and diseases. This is a rapidly developing area, and we are expecting to find more diverse biology of stromal cells in various contexts in the coming years.

27.05.2025 17:52 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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We re-annotated our previous human and mouse scRNA-seq data and picked up a few specific markers for each stromal subset. You can find more genes in the text and cited references. We also deposited re-annotated Seurat objects to Zenodo zenodo.org/records/1533...

27.05.2025 17:52 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Despite the different annotation strategies used by different groups, the structure of scRNA-seq data is often conserved across studies. In addition, each subset is often characterized by distinct localizations. We carefully compared datasets and reviewed evidence of locations

27.05.2025 17:52 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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You did scRNA-seq of the lung, but can't decide on stromal annotation? Or trying to pick up Xenium probes? We got you! We wrote a review of stromal heterogeneity in the adult lung delineated by recent single-cell genomics studies. journals.physiology.org/doi/full/10....

27.05.2025 17:52 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
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Wild flowers are thriving at Mori point, CA

21.04.2025 03:12 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

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