A pictures of Johanna presenting at ISMB
Gave my first conference talk at #ISMBECCB2025.
Presented *gemsparcl* πβ¨, my PhD tool for clustering millions of genomes into species-level clusters - fast.
So grateful to have been selected for a talk and enjoyed connecting with so many great people!
Preprint hopefully coming later this summer! βοΈ
24.07.2025 12:01 β π 25 π 4 π¬ 1 π 0
A photograph of a speaker on a stage and a screen projecting presentation slides.
A photograph of an EMBL-EBI booth at a conference.
A photograph of a speaker on stage with a screen projecting presentation slides and an audience looking towards the stage.
Did you attend @iscb.bsky.social's #ismbeccb2025 π¬π§? @ebi.embl.org colleagues (including reps from #Ensembl, @deciphergenomics.bsky.social, @training.ebi.embl.org, @pdbeurope.bsky.social and @expressionatlas.bsky.social) surely did! π§¬
We snapped some pics of @malloryfreeberg.bsky.social in action π€
23.07.2025 17:22 β π 8 π 3 π¬ 0 π 1
Now we have what I call the big three biomes represented in @mgnifydb.bsky.social, soil, marine and human. We are constantly looking for MAGs to add to our catalogues. Talk to @tgurbich.bsky.social if you have data you want to contribute.
22.07.2025 14:51 β π 6 π 3 π¬ 0 π 0
Great to see jackhammer is back! If you have not tried it please give it a go. We would welcome constructive feedback. We are still adding features.
22.07.2025 14:41 β π 2 π 4 π¬ 0 π 0
Phill Read presenting RO-Crate in #BOSC2025, weβve been increasing numbers of papers with associated RO-Crates, and have a summer internship working on it at the moment #ISMBECCB2025
22.07.2025 14:26 β π 1 π 3 π¬ 0 π 0
MGnify are at ISMB/ECCB 2025 this week!
Catch our talks on Wednesday to learn about our latest services and tools. π #ISMB2025 #ISMBECCB2025
21.07.2025 15:46 β π 9 π 2 π¬ 1 π 0
The enigma machine on display at the Alan Turing Institute, London.
Attended a meeting on AI and biological research at the Alan Turing Institute, convened by the UK Cabinet Office. Interesting discussions on the benefits, risks and challenges. A big challenge for @ebi.embl.org will be delivering data slices, moving it to HPCs and then on to the GPUs efficiently.
24.01.2025 11:23 β π 2 π 0 π¬ 0 π 0
Email announcing the first release of Ensembl
Cake to celebrate 25 years of Ensembl
Celebrating 25 years of @ensembl.bsky.social - the first announcement from @ewanbirney.bsky.social, milestone 1 was ensembl.org - thanks to all have worked on the resource, and the scientists who use it. Many exciting developments to present pangenomes, capture biodiversity and scale for the future
23.01.2025 22:08 β π 31 π 8 π¬ 1 π 1
PhD student at EMBL-EBI and the University of Cambridge
Finn @robdfinn.bsky.social and Lees Group @bacpop.org
Biosequence analysis using profile hidden Markov Models.
HMMER is managed by EMBLβs European Bioinformatics Institute (EMBL-EBI).
RNA bioinformatician | Building http://riboscope.com and http://r2dt.bio | Previously led RNAcentral, Rfam, and RNA 3D Hub
Professor of Genetics & Development, King's College London. Neural crest biology - MOUSEπ πΈHUMANπ πΈ FROG sneaky π£
βοΈ My opinions will someday be the opinions of my employer.βοΈ
Bioinformatician at MGnify (EMBL-EBI) working on MAG catalogues | PhD in Integrative Biology | UC Berkeley alum | Metagenomics, bioinformatics, evolutionary biology
Web Developer, Father, Bourbon enthusiast, Scout
Distributed challenge-led research clusters working with the Mary Lyon Centre at MRC Harwell to accelerate understanding of human disease using #MouseModels
The UKβs national facility for mouse genetics and the use of mouse models for the pre-clinical study of human disease
Molecular informatics, Soil microbial communities, @ukceh.bsky.social Bangor. She/her.
I'm a software dev working with bioinformatics pipelines mostly. Python and Nextflow on a daily basis.
@mgnifydb.bsky.social Production Project Leader at @ebi.embl.org & Nextflow ambassador @nextflow.io
Unfrequent blogging - https://www.mberacochea.cc
Bioinformatician | Software Engineer | Research Fellow
at EMBL-EBI
Biologist #UniversityofStrasbourg Interested in #RNA sensing, nucleic acids, cyclic nucleotids and everything about #Drosophila...
https://ibmc.cnrs.fr/en/laboratoire/m3i-en/equipes/antiviral-immunity-in-insects/
@GBIF Lead scientific officer, Associate Prof. (Docent) @helsinkiuni. Data, fungi, beetles, trees, books & dead wood. Mix of work, research and personal posts
Making sense of genomics through data and tech π§¬π»
PhD Candidate at Indian Institute of Science Bangalore #IISc | Evolution | Genomics | Proteomics
Coursera: https://www.coursera.org/user/084d38d788a520803885f17ff693d99e
Github: https://github.com/ankeetkumar
Group Leader @ Blizard Institute, Queen Mary University of London | Microbiome | Ecology & Evolution | Infectious Disease
www.bateslab.uk
Postdoc in Osterman lab at SBP Medical Discovery Institute.
Interested in the functional annotation of genomic and metagenomic data, carbohydrate metabolism, #bifidobacteria
Computational biologist. Research staff scientist and research coordinator in the @borklab.bsky.social at @embl.org Heidelberg.