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@pxthxk.bsky.social

PhD-ing / @jmarshlab.bsky.social

37 Followers  |  72 Following  |  1 Posts  |  Joined: 30.11.2024  |  1.3143

Latest posts by pxthxk.bsky.social on Bluesky

Can MAVEs and population-free VEPs be combined to improve variant classification? VEPs detect a broad range of pathogenic variants, while MAVEs give more conservative & decisive calls. Combined, they equitably reclassify >90% of VUS. Read more in our study on combining evidence from MAVEs and VEPs:

09.12.2025 18:41 โ€” ๐Ÿ‘ 4    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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acmgscaler: An R package and Colab for standardised gene-level variant effect score calibration within the ACMG/AMP framework A genome-wide variant effect calibration method was recently developed under the guidelines of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology (ACMG/A...

Weโ€™ve updated the acmgscaler manuscript following reviewer and community feedback.

The R package now has a single calibrate() function, and the Colab interface is easier to use.

๐Ÿ“„ Manuscript: www.biorxiv.org/content/10.1...
๐Ÿงช Colab: edin.ac/4mjzijp

#rstats @theacmg.bsky.social

15.08.2025 08:35 โ€” ๐Ÿ‘ 3    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
30.11.2024 20:17 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

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