🚀 Anders S. Christensen

NIH funding supporting the HMMER and Infernal software projects has been terminated. NIH states that our work, as well as all other federally funded research at Harvard, is of no benefit to the US.

22.05.2025 12:42 — 👍 288    🔁 232    💬 37    📌 46

Obviously, finding diverse homologs violates federal civil rights law. We should be finding the most qualified homologs!

github.com/EddyRivasLab...

28.05.2025 16:59 — 👍 39    🔁 7    💬 1    📌 2

New images could change cancer diagnostics, but ICE detained the Harvard scientist who analyzes them Without scientist Kseniia Petrova’s expertise, no one can fully unlock the data’s potential, putting crucial advancements in early cancer detection at risk.

Almost every line of this story would have been simply unbelievable a few months ago:

—Pioneering cancer researcher;
—*Arrested* at airport in Boston;
—Now indefinite ICE detention in Louisiana;
—"Crime": not declaring some frog-embryo samples for research.

Read it.
www.nbcnews.com/news/us-news...

22.04.2025 01:32 — 👍 29411    🔁 13688    💬 740    📌 859

Building Your Own AI & E-Ink Powered Art Gallery: A Local DIY Guide This blog will contain technical write-ups with very varying contents. We will try to use tags/category as much as possible to avoid mixing everything up. Usually content is about some github project ...

This is my second blog post this year! We wanted random art on our walls daily, so we built privacy-focused e-ink picture frames powered by ESP32. Everything is local; no internet.

charnley.github.io/blog/2025/04...

#eink #esp32 #homeassistant #ai

02.04.2025 18:11 — 👍 11    🔁 5    💬 0    📌 0

NeurIPS participation in Europe We seek to understand if there is interest in being able to attend NeurIPS in Europe, i.e. without travelling to San Diego, US. In the following, assume that it is possible to present accepted papers ...

Would you present your next NeurIPS paper in Europe instead of traveling to San Diego (US) if this was an option? Søren Hauberg (DTU) and I would love to hear the answer through this poll: (1/6)

30.03.2025 18:04 — 👍 281    🔁 160    💬 6    📌 14

RDKit North American UGM/Cheminformatics Meeting We are pleased to announce we are finally having a North American RDKit UGM Meeting in 2025. The event will be held at the Bristol Myers S...

If you are in the Boston area this April, I recommend visiting RDKit North American UGM/Cheminformatics Meeting on April 10th bagimcommunications.blogspot.com/2025/01/rdki... #ChemSky #cheminfomatics #compchem

17.01.2025 14:57 — 👍 10    🔁 4    💬 0    📌 0

163163 Associate professor or Tenure-track assistant professor in computational drug development

Associate professor or Tenure-track assistant professor in computational drug development, U Copenhagen 🇩🇰 employment.ku.dk/faculty/?sho... #compchem

17.01.2025 06:14 — 👍 27    🔁 23    💬 1    📌 1

Inertia vectors

Aligned molecules

Atom descriptors

I was asked to improve my documentation for my rmsd Python package, which sent me down a rabbit hole. I ended up finding an improvement to the way the package is doing Inertia alignment of the molecule and finding pretty ways in matplotlib to illustrate the concepts github.com/charnley/rmsd #chemsky

09.01.2025 12:34 — 👍 6    🔁 2    💬 0    📌 0

Graduate Research Intern - Machine Learning for Protein Structure Prediction JOB SUMMARY We are seeking a graduate student for a research internship at Iambic Therapeutics to contribute to the development of NeuralPLexer, our protein structure prediction platform. This intern...

i’m hiring! come work with our amazing neuralplexer development team at iambic therapeutics to help increase the conformational accuracy of our protein structure predictions!

pls share with folks you think may be interested, & feel free to reach out with questions

jobs.ashbyhq.com/iambic-thera...

08.01.2025 22:40 — 👍 11    🔁 3    💬 0    📌 0

move over ligand RMSD < 2 Å 😤 ConfBench is on the scene!

if you're interested in the evaluation of conformational accuracy of structure prediction methods, take a look at our first stab at a systematic conformational benchmark in the NP3 technical report below! 🧵

www.iambic.ai/post/np3-tec...

17.12.2024 04:37 — 👍 49    🔁 15    💬 1    📌 1

ggwp

17.12.2024 11:27 — 👍 1    🔁 0    💬 0    📌 0

GitHub - qmlcode/qmllib: Quantum machine learning (QML) Core Fortran Functions Quantum machine learning (QML) Core Fortran Functions - qmlcode/qmllib

I finally got the time to clean up `qml`, and translated it to the new pip package `qmllib`, working with numpy2.0 with consistent argument and function naming github.com/qmlcode/qmllib

17.11.2024 12:44 — 👍 12    🔁 5    💬 2    📌 0

NeuralPLexer3: Physio-Realistic Biomolecular Complex Structure Prediction with Flow Models

NeuralPLexer3: Physio-Realistic Biomolecular Complex Structure Prediction with Flow Models www.iambic.ai/post/np3-tec...

17.12.2024 09:36 — 👍 3    🔁 0    💬 0    📌 0