Today I found out that the Pacbio tools for working with barcodes and adapters in Kinnex are called lima and skera. To whomever came up with that joke, I salute you, you’ve reached 50% of the audience
31.10.2025 14:06 — 👍 0 🔁 0 💬 0 📌 0@pmelsted.bsky.social
Professor @hi.is in CS, head of rna seq data analysis at decode genetics (views are mine). Bioinformatician, epistemic trespasser, &c. ps. I hate GTF files
Today I found out that the Pacbio tools for working with barcodes and adapters in Kinnex are called lima and skera. To whomever came up with that joke, I salute you, you’ve reached 50% of the audience
31.10.2025 14:06 — 👍 0 🔁 0 💬 0 📌 0Retracting a paper is going to hurt
21.10.2025 20:01 — 👍 2 🔁 0 💬 0 📌 0All right, I posed this question to my PhD student this morning and he looked at me funny and asked if it was a trick question
What is the running time of this code
a, b = 0, 1
for _ in range(2, n+1):
a, b = b, a + b
return b
Happy Q4 for those who celebrate
01.10.2025 20:31 — 👍 1 🔁 0 💬 0 📌 0Today I fixed a humming converter and an intercom receiver set from the 70’s. I’m surprised at how good ChatGPT is at diagnosing problems and coming up with fixes for hardware that is older than me. Since I didn’t have to replace the units I can justify the cost and environmental impact of AI
27.09.2025 23:28 — 👍 3 🔁 0 💬 0 📌 0The Genome Informatics conference (@ Cold Spring Harbor Lab, Nov 5 - 8) abstract deadline is **today**. We welcome your submissions! Topics include:
- PanGenomes
- Genome Assembly & Seq. Algos.
- Algorithmic Evo. Bio
- Single Cell & Spatial Omics
- Microbial Genomics
- AI/ML & Integrative Omics
🙏🙏🙏
Perfect marketing doesn’t exi…
05.07.2025 11:22 — 👍 0 🔁 0 💬 0 📌 0Glengarry Glen Ross
05.07.2025 10:41 — 👍 1 🔁 0 💬 0 📌 0It is by the juice of coffee that thoughts acquire speed …
27.06.2025 12:39 — 👍 1 🔁 0 💬 0 📌 0Job alert: Join us for a postdoc in AI in genetics at @EMBL Heidelberg! Great collaboration with @Adrian Cortes @GSK, aiming to develop new tools to elucidate genetic effects using population-scale cohorts and single-cell readouts. Please share!
embl.wd103.myworkdayjobs.com/de-DE/EMBL/d...
I misread that as “message” which would have been more impressive 🚩
24.06.2025 12:57 — 👍 1 🔁 0 💬 0 📌 0I have an opportunity to hire a staff scientist for my lab. Looking for someone with outstanding skillset in ML/statistics, genomics applications; interest in mentoring, strong publication record, PD experience required.
Email CV to me+cc my assistant (see 'contact' on my website). Ad to follow.
I had Ágætis byrjun on repeat for a long time. Just happened upon this on Spotify the other day and I’d forgotten how good it was
20.05.2025 19:30 — 👍 2 🔁 0 💬 0 📌 0In Iceland spring is not something you define as season based on weather but more from the arrival of migratory birds
09.05.2025 09:01 — 👍 3 🔁 0 💬 0 📌 0For me it’s kind of in the same category as woodworking videos that create beautiful custom tables from slabs of oak. Looks great and maybe someday I can use this.
05.05.2025 12:25 — 👍 1 🔁 0 💬 1 📌 0vm.tiktok.com/ZNd6ebsjN/
I actually learned something new here
My favorite brainrot is an account on TikTok that solves complicated integrals on a blackboard with colored chalk.
05.05.2025 09:39 — 👍 4 🔁 0 💬 1 📌 0When you refresh to see new posts you lose where you were. This is the only thing I miss about twitter
02.05.2025 20:21 — 👍 1 🔁 0 💬 0 📌 0There is something refreshingly honest about moving the goalpost this blatantly. Adjusting for multiple testing? Not in my house ☝️
30.04.2025 22:20 — 👍 3 🔁 1 💬 0 📌 0Join our lab to study transcriptional regulation in mouse germ cells and embryonic stem cells at @haskoliislands.bsky.social in beautiful Reykjavík!
Apply here: tinyurl.com/34y6jcrd
#epigenetics #TranscriptionFactors #transcriptomics #stemCells #pluripotency
Hold my mead. 1200 from Iceland
handrit.is/manuscript/v...
Today I gave a lecture in a brand new lecture hall where the projector was acting weird. Turned out that the control panel showed green for when the projector was off, you had to press the button wait 10 seconds and then it turned red.
I think this should be a case study in UI design
I might need to replicate this paper www.nature.com/articles/s44...
07.02.2025 13:20 — 👍 2 🔁 0 💬 0 📌 0Somehow I would be more confident that the Tesla could drive autonomously if the auto mode on the windshield wipers worked.
23.01.2025 21:52 — 👍 0 🔁 0 💬 0 📌 0Ironically this is the best content on that other place
13.01.2025 14:19 — 👍 2 🔁 0 💬 0 📌 0Beautiful polar stratospheric clouds today
05.01.2025 17:25 — 👍 2 🔁 0 💬 0 📌 0Acceptable substitutes are The Hours, The Four Seasons, and Succession (season 2).
05.12.2024 01:41 — 👍 1 🔁 0 💬 0 📌 0