Kazuaki Amikura 's Avatar

Kazuaki Amikura

@amikura.bsky.social

Researcher @Yale -> 🚀 -> @RIKEN, Japan #Ribosome #Synbio

27 Followers  |  27 Following  |  3 Posts  |  Joined: 07.02.2024  |  1.4095

Latest posts by amikura.bsky.social on Bluesky

Our new preprint is now available! We found a new Group I intron insertion site in tRNA genes of Patescibacteria. These tRNAs were missed by standard tRNA annotation tools. #microbiology #tRNA #Patescibacteria

04.07.2025 06:43 — 👍 1    🔁 0    💬 0    📌 0
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Phylogenomic analyses indicate the archaeal superphylum DPANN originated from free-living euryarchaeal-like ancestors - Nature Microbiology Phylogenetic reconstructions with conserved protein markers from the 11 known DPANN phyla reveal their monophyletic placement within the Euryarchaeota.

🎉 Now out “Phylogenomic analyses indicate the archaeal superphylum DPANN originated from free‑living euryarchaeal‑like ancestors” www.nature.com/articles/s41...

17.06.2025 14:25 — 👍 88    🔁 38    💬 2    📌 0
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Here, we show that bacterial ribosomes—often viewed as conserved drug targets—actually vary across species due to extensive sequence variation in their drug-binding residues. In some cases, this divergence may lead to intrinsic drug resistance in certain bacterial clades: doi.org/10.1016/j.ce...

19.06.2025 07:31 — 👍 31    🔁 20    💬 0    📌 3
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Microbe with bizarrely tiny genome may be evolving into a virus With DNA focused almost entirely on replication, newly discovered organism blurs the line between cells and viruses

"With an apparent inability to live outside its host, and with a genome less than half the size of the previously smallest archaeon genome, Sukunaarchaeum is unlike any other archaeon known." ➡️ www.science.org/content/arti... #MicroSky #Archaea

18.06.2025 18:13 — 👍 10    🔁 5    💬 2    📌 0
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Structurally heterogeneous ribosomes cooperate in protein synthesis in bacterial cells - Nature Communications Cells can simultaneously produce structurally dissimilar ribosomes, suggesting functional specialization of distinct ribosome populations. Here, the authors show that distinct ribosomes cooperate rath...

Here we unexpectedly find that the ribosomal protein S20/L26—identified at the dawn of ribosome research but later deemed a biochemical artifact—is indeed a genuine component of the large ribosomal subunit. More on this ribosome content variation is here: www.nature.com/articles/s41...

20.03.2025 22:05 — 👍 45    🔁 23    💬 1    📌 2
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The binding of RbgA to a critical 50S assembly intermediate facilitates YphC function in bacterial ribosomal assembly Abstract. The intricate process of 50S ribosomal subunit assembly in Bacillus subtilis involves multiple parallel pathways converging into a crucial interm

The binding of RbgA to a critical 50S assembly intermediate facilitates YphC function in bacterial ribosomal assembly
academic.oup.com/nar/advance-...

11.12.2024 00:11 — 👍 2    🔁 2    💬 0    📌 0

Evolutionary flexibility of ribosome biogenesis in bacteria www.biorxiv.org/content/10.1... #jcampubs

02.12.2024 15:36 — 👍 3    🔁 2    💬 0    📌 0

Our preprint is now available!🎊🚀

Ribosome biogenesis in CPR bacteria was unexpectedly flexible, challenging traditional view of this essential process in evolution.

#Ribosome #CPR #Evolution

08.12.2024 12:19 — 👍 6    🔁 1    💬 0    📌 0

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