@helmholtzimaging.bsky.social
Unlocking the potential of #imaging at the Helmholtz Association. Host Centers: DESY, DKFZ & MDC #HelmholtzImaging #ImagingScience
Visual to promote Helmholtz Imaging Newsletter
Our final newsletter of the year is out! 🙌
Conference survey, new tools & workshop recording, community updates & more - all in one place!
Happy reading 👉 bit.ly/HI-Newslette...
Image: Daniela Tirsch, @dlr-next.bsky.social & Björn Schreiner, @freieuniversitaet.bsky.social
@helmholtz.de
HMC @ #NFDI4DS Conference
HMC @ #NFDI4DS Conference @fraunhoferfokus.bsky.social in #Berlin!
Don’t miss tomorrow’s Talk “Building a federated data science ecosystem: The Helmholtz Platforms 5 years on” by our colleague from #HIFIS (Wed, 12:20). Stop by to learn more & find an #HMC colleague on site for #metadata questions!
Helmholtz Munich to Advance AI Benchmarking With Three Newly Funded Projects
#HelmholtzMunich to Advance AI Benchmarking With Three Newly Funded Projects
Shaping the next generation of trustworthy, scientifically robust #AI across research domains.
👉 t1p.de/ubzam
@helmholtz.de @helmholtzai.bsky.social @comphealthmunich.bsky.social @helmholtzimaging.bsky.social @stes.io
Meet #PixelPatrol, a new (early-version) quality control & exploration tool for scientific image datasets.
PixelPatrol helps you quickly assess quality, consistency, and completeness of your data BEFORE diving into analysis.
Explore the tool 👉 helmholtz-imaging.de/news/pixelpa...
@helmholtz.de
Screenshots von Analysetools für 3D Bilddaten. Das erste Bild zeigt die Segmentierung verschiedener Organellen einer Betazelle. Das zweite Bild zeigt die Verteilung der Insulingranula in dieser Zelle.
Diagramme zur 3D Verteilung von Insulingranula im Verhältnis zum Golgi Apparat.
Wenn alles hübsch segmentiert ist, wollen wir natürlich auch noch Daten gewinnen. Z.B. wieviel Insulin in den Zellen ist und wie es verteilt ist, oder mit anderen Organellen interagiert. Dafür nutzten wir Tools, die von @helmholtzimaging.bsky.social entwickelt wurden (siehe Bild).
12.11.2025 14:38 — 👍 11 🔁 2 💬 0 📌 0The Helmholtz Platforms Roadshow is tomorrow! 👏
Join us at 11 AM CEST to explore how Helmholtz Imaging & our partner platforms can support your research. 👇
Our colleagues Sara Krause-Solberg & Philipp Heuser will be there — bring your questions and join the discussion!
#datascience @helmholtz.de
Kick‑start your career in #DataScience & #IT with @helmholtz.de! Join the Career Day on 26/11.
What to expect:
▪️ Insights into diverse career paths
▪️ Networking
Featured speaker: Annika Reinke (Helmholtz Imaging Research Unit, @dkfz.bsky.social
Register 👉 events.ringcentral.com/events/helmh...
Don’t miss "Einstein in the Dome: In the Universe of Atoms" on 5/11 at 7 PM Zeiss Grand Planetarium in Berlin!
Deborah Schmidt, our Engineering and Support Unit Head at @mdc-berlin.bsky.social visualized the folding of proteins based on data from Cecilia Clementi’s group. 🙌 Free entry!
More 👇
Visual to promote the 12 projects from the Helmholtz UNLOCK call
@helmholtz.de is taking the next big step toward trustworthy AI! 12 projects from the UNLOCK call will build open, high-quality multimodal, and cross-domain benchmarks to test & compare AI models across science.
More 👉 bit.ly/UNLOCK-Launch
#AI #Benchmarking #Helmholtz #OpenScience #unlock
We’re thrilled to see Deborah highlighted @helmholtzai.bsky.social! 👏 At #HelmholtzImaging, she leads our Engineering & Support Unit at @mdc-berlin.bsky.social, developing tools for image analysis across scales & maintaining Helmholtz Imaging Solutions 👉 bit.ly/HelmholtzIma...
#AI #ImagingScience
Group photo, workshop of mathematics of tranformers, September 2025, Hamburg
Researchers from across Europe met at DESY to explore an emerging field: the mathematics of transformers. The workshop connected experts from theory and practice to advance our understanding of deep learning.
More 👉 bit.ly/mathematics-...
@helmholtz.de @helmholtzai.bsky.social #AI #transformers
Only a few spots left!
Join our 3D Data Visualization Workshop (Nov 10–13, Berlin) & bring your volumetric data to life with tools like Fiji, Blender & Neuroglancer.
Open to Helmholtz & HIDA community
Register by Oct 26 👉 events.hifis.net/event/2781/
@helmholtz.de @mdc-berlin.bsky.social
Working with data, code, images, or metadata? Join the virtual #Helmholtz Platforms Roadshow on 12/11 at 11 AM 👉 bit.ly/Helmholtz-Pl...
Meet @helmholtzai.bsky.social, HIDA, HIFIS, HMC & @helmholtzimaging.bsky.social and discover free tools, training & support for your research.
@helmholtz.de
🌟 We’re excited to share our weekly showcase of the Best Scientific Images 2025 on Instagram starting next week! 📸
Join us @HelmholtzImaging to explore winning images and top runners-up that celebrate the beauty of science 👉 bit.ly/HIonInstagram.
#HIbestimage25 #imaging @helmholtz.de
Registration open: Introduction to Image Registration workshop
Explore fundamental concepts & practical techniques for image registration!
📅 Oct 29, 10–11:30 AM CEST (online)
Open to @helmholtz.de & HIDA partners
Register 👉 bit.ly/intro-image-...
#HelmholtzImaging #imaging #datascience
Visual to promote the Helmholtz Imaging Newsletter No. 23, image by Jenny Hein & Thomas van de Kamp, KIT
Our new #HelmholtzImaging Newsletter is out! 🙌
Highlights include new #datascience courses, innovative #imaging applications, a new data tool & #sciencecommunication support.
Dive right in 👉 bit.ly/HI-Newsletter-23
Image: @jennyhein.bsky.social & Thomas van de Kamp, @kit.edu
@helmholtz.de
Regularization in Image Reconstruction – Registration open
Gain an understanding of image reconstruction & inverse problems: regularization, deep learning & Bayesian methods - w/in hands-on tutorials.
📅 Oct 6 (7h, online) | Free for @helmholtz.de employees & HIDA partners
👉 bit.ly/regularizati...
Emanuel Söding’s keynote “The Road to FAIR”
HMC Posters
Great conversations at our joint #HIDS booth in the foyer
Don't miss the #HIDS booth
Day 2 at #dss2025 🚀
Yesterday: great poster sessions + lots of interest at our #HIDS booth.
Today: the Metadata Session featured Emanuel Söding’s keynote “The Road to FAIR”– very well received & sparked invitations to present elsewhere!
👉 Catch Emanuel at the Collaboration Coffee (13–14h) on ELNs
HIDS booth at DSS2025 at HEREON
We’re at the DSS2025 at Hereon!
Discover what @helmholtzai.bsky.social, #HelmholtzImaging, HIDA, HIFIS & HMC can offer in #AI, #imaging, training, software & #metadata to boost your research – all4free.
✨ Don’t miss Hans Werners’ talk on the Helmholtz Model Zoo today at 16:30.
Drop by & say hi!
New course alert: 3D Data #Visualization!
Bring your volumetric data to life with tools like Fiji, Blender & Neuroglancer.
📅 Nov 10–13, 2025
📍 On-site, Berlin
Free & open to individuals affiliated with @helmholtz.de or a HIDA partner
Register now 👉 events.hifis.net/event/2781/
#imaging #3D
Only two weeks to go: HMC Welcome Meeting for HMC Project Cohort from 2024!
8 projects, 10-min talks, big ideas for better metadata.
📅 11 Sept 2025, 10:00–12:00 CEST
🔗 events.hifis.net/e/HMC-Welcom...
#HMC_Projects
Oct 16: Last, but not least: Dagmar Kainmüller (Helmholtz Imaging, @mdc-berlin.bsky.social) on current machine learning models for image segmentation—including how to apply such models to large data.
Register for the series 👉 bit.ly/6-image-proc...
@helmholtz.de
#imaging #Segmentation
We’re kicking off 🚀 HMC Open Office Hours!
Got metadata questions – big or small? Not sure where to start? Just drop by and ask! Each session is hosted by a different HMC Unit, but all questions are welcome.
📅 Upcoming sessions & topics: helmholtz-metadaten.de/en/hmc-open-...
✨ Info Event: Helmholtz AI Project Call 2025
📅 17 Sept – discover how to secure up to €250k INF funding for your ambitious ML & AI projects, meet the Helmholtz AI team & find collaborators.
🔗 Register by 16 Sept: events.hifis.net/event/2332/
#HelmholtzAI #ProjectCall #AI #ML
⏳ Only 10 days left to register!
Join us in Berlin, Sept 29–Oct 1, 2025, for 3 days of talks, workshops, barcamp sessions & keynotes – all focused on shaping the future of teaching in research.
Registration closes September 5, 2025 – don’t miss out!
🔗 events.hifis.net/event/2331
#TEACH2025 #HMC
Oct 9: Deborah Schmidt (Helmholtz Imaging, @mdc-berlin.bsky.social) on visualizing spatial datasets. Learn how to tell your data’s story through visualizations.
Register for the series 👉 bit.ly/6-image-proc...
@helmholtz.de
#imaging #datavisualization #3D #spatial
Oct 2: Ullrich Koethe (@uniheidelberg.bsky.social) on explainable machine learning. Understand what drives decisions in neural networks & how to improve them.
Register for the series 👉 bit.ly/6-image-proc...
@helmholtz.de
#imaging #XAI #machinelearning #DeepLearning
Sept 25: Learn to track objects over time and instances. With Carsten Rother (@uniheidelberg.bsky.social).
Register for the series 👉 bit.ly/6-image-proc...
@helmholtz.de
#imaging #Tracking #ImageAnalysis
Sept 18: Learn how to remove noise from imaging data with supervised, self-supervised & generative AI. With @alex-krull.bsky.social (University Birmingham).
Register for the series 👉 bit.ly/6-image-proc...
@helmholtz.de
#imaging #ImageDenoising #AI
Sept 11: Christoph Lerche (@fz-juelich.de ) on tomographic reconstruction in MRI, CT & PET. Understand the fundamentals behind 3D medical images.
Register for the series 👉 bit.ly/6-image-proc...
@helmholtz.de
#imaging #MedicalImaging #Tomography
