Itβs out! Using cryo-ET in Dicty cells, we take a fresh in situ look at vaults. Surprisingly, we uncover vaults associated with ER and NE membranes, and find that many vaults enclose ribosomes in defined orientations, opening new avenues to their cellular function! www.biorxiv.org/lookup/conte...
16.12.2025 08:17 β π 106 π 39 π¬ 2 π 5
Check out our new preprint on an integrated pipeline combining in situ #cryo-ET with MALDI #MSImaging for single-cell identification and classification from previously analysed EM-grids.
Link: www.biorxiv.org/content/10.1...
19.09.2025 18:07 β π 55 π 14 π¬ 1 π 2
mzio β Accelerate Scientific Discoveries
Only used it for small molecule and imaging datasets so far: mzmine mzio.io It reads timstof files natively and is super fast compared to data analysis.
23.07.2025 06:28 β π 1 π 0 π¬ 1 π 0
As permanent lock-mass or injectable?
03.04.2025 18:53 β π 0 π 0 π¬ 1 π 0
That's quite a difference! - Wanted to test that for our Tims files, but the automatic file conversion in RawBeans produces insanely large mzml files that crash later on. Is there a specific setting / how do you convert the raw files for that?
01.04.2025 16:13 β π 1 π 0 π¬ 1 π 0
All of this was a preview on ASMS releases this year, but no idea when it'll practically be available...
27.03.2025 10:08 β π 1 π 0 π¬ 0 π 0
Bruker showed a lot on their DE/EU user meeting already:
-Entry level metabolomics TIMS; with low mass capable quad
-Biopharma (Omnitrap-)TIMS
-AIP ion processor upgrade (improved ion transfer CC->TOF)
-More robust nanoLC (nanoResolve?), an upgraded nE2 with ceramic valves, AS pump & inline filters
27.03.2025 09:17 β π 3 π 1 π¬ 1 π 0
It elutes rather late in the gradient / wash step - not sure if it would come off an Evotip. For our workflow it also gets filtered out as a +1 charge in ion mobility.
19.03.2025 10:35 β π 1 π 0 π¬ 1 π 0
An easy way to test is either by trap injection (higher equilibration volume for flushing out air) or to set the air gaps to "0" in the advanced settings
15.01.2025 15:13 β π 1 π 0 π¬ 2 π 0
Does it only occur during runs or also with idle flow at these solvent compositions?
Did you recently update the LC-Plugin? We've had similar issues after that (2.1 SR2) and found a software bug, where to much air is drawn during the injection, which creates spray instabilities.
15.01.2025 15:11 β π 0 π 0 π¬ 1 π 0
www.shimadzu.com/an/products/...
09.02.2024 10:22 β π 1 π 0 π¬ 1 π 0
She/her.
Doctoral researcher at MPI for Brain Research, in the lab of @erin-schuman.bsky.social.
Molecular Neuroscience. RNA biology and ribosomes. Local Translation. CRISPR systems.
Hyped about bioengineering and AI in biology.
Amateur illustrator.
Absea Biotechnology | Empowering protein science
14,000+ recombinant proteins & 11,000+ monoclonal antibodies covering 70% of the human proteome.
Germany-USA-China
https://www.absea.bio/index.html
comp chemist, structural biologist & mass spectrometrist ποΈ hiker | π§π»ββοΈclimber | π¨ artist | π€π»alum @UTAustin @UCLA @CZI #chemoproteomics
Bioinformatics and Computational Metabolomics
Proteomes (ISSN 2227-7382) is an #openaccess, peer reviewed journal on all aspects of #Proteomics science, published quarterly online by @mdpiopenaccess.bsky.social
Der ADFC Frankfurt zΓ€hlt zu den groΓen und sehr aktiven KreisverbΓ€nden im ADFC. Mit 4800 Mitgliedern setzen wir uns fΓΌr ein fahrradfreundliches Frankfurt ein.
π Ei, Gude und herzlich willkommen auf dem offiziellen Account der Verkehrsgesellschaft Frankfurt am Main mbH.
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Biophysicist. Traveler. Crafter.
Open Science and Sustainability enthusiast.
Postdoc w/ Erin Schuman @MpiBrain studying protein complexes in neurons using cryoET. PhD @EMBL Heidelberg @Beck_Laboratory.
Scientist. She/her. I like cryoET, fluorescence microscopy, and cell biology.
Developing cryoCLEM methods in the Mahamid lab at EMBL Heidelberg. Formerly studying NPCs in the Beck Lab at MPIBP Frankfurt. MBL Physiologyβ23 alumn.
molecular systems biology of the synapse | snsf ambizione | spatial proteomics | molecular neuroscience
https://bit.ly/MvO
PhD student @Becklab.bsky.social @Mpibp.bsky.social within @imprs-cbp.bsky.social. Structural proteomics fan, working at the interface of #TeamMassSpec and #TeamTomo
An inter-institutional collaborative #spatialbiology technology hub under @researchlifesci.bsky.social that offers access to cutting-edge #spatialomics technologies.
https://www.health-life-sciences.de/multispace/
I work as a Field Application Scientist at Bruker. I'm interested in coffee, sports, science and a lot of leg space. Views are my own. he/him. #Proteomics #TeamMassSpec
Senior Scientist @ Thermo (San Jose)
Computational Metabolomics, Open Software Development, Open and Reproducible Research, R, Emacs, Bioconductor, Mountains; also on https://fediscience.org/@jorainer
I love science, coffee, and humans.
Ask me about TopDown Proteomics!
MS-based proteomics at University of Copenhagen
Bayerisches Zentrum fΓΌr Biomolekulare Massenspektrometrie | TUM School of Life Sciences | Proteomics | Metabolomics | Bioinformatics | π©πͺ