Interesting paper from Gernot LΓ€ngst & Co. They calculated nucleosome repeat length in Plasmodium falciparum, the malaria-causing parasite, and showed that it follows a smooth continuous function of time (the numbers on the X axis below are hours post-invasion) www.biorxiv.org/content/10.1...
04.10.2025 19:01 β π 9 π 1 π¬ 1 π 0
π Ordering lab supplies just got way easier in our lab.
We built a workflow (github.com/farnunglab/N...) where tapping an NFC tag on a reagent bottle automatically triggers an order request in Quartzy. No more scribbling notes or hunting for a computer. Hereβs how π
26.09.2025 13:15 β π 29 π 9 π¬ 1 π 1
In the most recent episode of the Epigenetics Podcast, we talked with Mo Motamedi from the Center for Cancer Research at Massachusetts General Hospital about his work on RNA-mediated epigenetic regulation. #epigenetics #podcast #chromatin
Listen here: activemotif.com/podcasts-mo-...
06.10.2025 07:01 β π 4 π 2 π¬ 0 π 0
In this episode of the Epigenetics Podcast, we talked with Mo Motamedi from the Center for Cancer Research at Massachusetts General Hospital about his work on RNA-mediated epigenetic regulation. #epigenetics #podcast #chromatin
Listen here: activemotif.com/podcasts-mo-...
03.10.2025 07:00 β π 3 π 0 π¬ 0 π 0
In the most recent episode of the Epigenetics Podcast, we talked with @em6wong.bsky.social from the University of New South Wales in Sydney about her work on how evolution shapes mammalian genes. #podcast #epigenetics #chromatin
Listen here: www.activemotif.com/podcasts-emi...
22.09.2025 07:00 β π 5 π 4 π¬ 0 π 0
In this episode of the Epigenetics Podcast, we talked with
Emily Wong from the University of New South Wales in Sydney about her work on how evolution shapes mammalian genes.
π§Listen here: activemotif.com/podcasts-emi...
@epigeneticspod.bsky.social #podcast #epigenetics #generegulation #UNSW
18.09.2025 22:39 β π 4 π 2 π¬ 0 π 0
Looking forward to listening!
19.09.2025 07:48 β π 4 π 1 π¬ 0 π 0
In this episode of the Epigenetics Podcast, we talked with @em6wong.bsky.social from the University of New South Wales in Sydney about her work on how evolution shapes mammalian genes. #podcast #epigenetics #chromatin
Listen here: www.activemotif.com/podcasts-emi...
19.09.2025 07:00 β π 3 π 0 π¬ 0 π 1
In the most recent episode of the Epigenetics Podcast, we talked with @arnausebe.bsky.social from the @crg.eu in Barcelona about his work on chromatin evolution. #podcast #chromatin #epigenetics
Listen here: www.activemotif.com/podcasts-arn...
08.09.2025 07:01 β π 5 π 2 π¬ 0 π 0
In this episode of the Epigenetics Podcast, we talked with @arnausebe.bsky.social from the @crg.eu in Barcelona about his work on chromatin evolution. #podcast #chromatin #epigenetics
Listen here: www.activemotif.com/podcasts-arn...
05.09.2025 07:01 β π 15 π 4 π¬ 0 π 0
Image of Niels Mejlgaar (CEO of DNRF), Anja Groth (EpiC director) & Jesper Fisker (CEO of DCS).
We have lift off!! π Yesterday was the official opening of EpiC! The DNRF Center for Epigenetic Cell Memory at the Danish Cancer Institute!
Our EpiC team with director Anja Groth @groth-anja.bsky.social, were joined by Jesper Fisker, CEO @cancer.dk & Niels Mejlgaar, CEO @dg.dk to celebrate π
28.08.2025 17:35 β π 52 π 12 π¬ 1 π 0
In the most recent episode we talked with @magnanilab.bsky.social from @icr.ac.uk about his work on epigenetic mechanisms of drug resistance and cancer cell dormancy in breast cancer. #podcast #epigenetics #chromatin
Listen here: activemotif.com/podcasts-luc...
25.08.2025 07:00 β π 5 π 5 π¬ 0 π 0
In this episode we talked with @magnanilab.bsky.social from @icr.ac.uk about his work on epigenetic mechanisms of drug resistance and cancer cell dormancy in breast cancer. #podcast #epigenetics #chromatin
Listen here: activemotif.com/podcasts-luc...
22.08.2025 18:17 β π 4 π 2 π¬ 0 π 0
In the most recent episode we talked with @korblab.bsky.social from @upenn.edu about her work on BRD4 and the histone variant H2BE, which influences synaptic genes and neuronal activity. #podcast #epigenetics #chromatin
Listen here: www.activemotif.com/podcasts-eri...
11.08.2025 07:00 β π 13 π 3 π¬ 0 π 0
In this episode we talked with @korblab.bsky.social from @upenn.edu about her work on BRD4 and the histone variant H2BE, which influences synaptic genes and neuronal activity. #podcast #epigenetics #chromatin
Listen here: www.activemotif.com/podcasts-eri...
08.08.2025 07:15 β π 13 π 3 π¬ 0 π 0
calling the @nucleosomepolice.bsky.social
06.08.2025 12:21 β π 3 π 0 π¬ 1 π 0
Chromatin Profiling: From ChIP to CUT&RUN, CUT&Tag and CUTAC (Steven Henikoff) | Epigenetics Podcast
In this episode of the Epigenetics Podcast, we caught up with Steven Henikoff from the Fred Hutchinson Cancer Research Center in Seattle to talk about his work on Chromatin Profiling: From ChIP to CUT&RUN, CUT&Tag and CUTAC.
In the last few years Steven Henikoff has been developing methods which profile the chromatin landscape by using enzyme tethering. The quest first started with ChEC-Seq, which improved on Uli Laemmli's method of Chromatin endogenous cleavage (ChEC) but used sequencing as a read-out rather than southern blotting. Next, Cleavage Under Targets & Release Using Nuclease (CUT&RUN) was developed by making a fusion protein of Protein A and micrococcal nuclease (MNase), making it possible to achieve antibody-targeted cleavage of chromatin fragments. And finally, Cleavage Under Targets & Tagmenation (CUT&Tag) was developed by using Transposase Tn5 instead of MNase, which adds sequencing adapters and fragments chromatin at the same time, streamlining the protocol even further.
In this episode we discuss how working on centromeres set the stage for Steven Henikoffβs subsequent work, how he developed CUT&RUN and CUT&Tag, what the advantages and disadvantages of those methods are and how he developed all those experiments at home in his garage.
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References
Takehito Furuyama, Steven Henikoff (2009) Centromeric nucleosomes induce positive DNA supercoils (Cell) DOI: 10.1016/j.cell.2009.04.049
Kristina Krassovsky, Jorja G. Henikoff, Steven Henikoff (2012) Tripartite organization of centromeric chromatin in budding yeast (Proceedings of the National Academy of Sciences of the United States of America) DOI: 10.1073/pnas.1118898109
Jorja G. Henikoff, Jitendra Thakur, β¦ Steven Henikoff (2015) A unique chromatin complex occupies young Ξ±-satellite arrays of human centromeres (Science Advances) DOI: 10.1126/sciadv.1400234
Epigenomics Methods: ChEC-Seq, CUT&RUN, AutoCUT&RUN, Improved CUT&RUN, CUT&Tag, Automated CUT&Tag, CUTAC, scCUT&Tag.
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Related Episodes
The Role of Non-Histone Proteins in Chromosome Structure and Function During Mitosis (Bill Earnshaw)
Hi-C and Three-Dimensional Genome Sequencing (Erez Lieberman Aiden)
In Vivo Nucleosome Structure and Dynamics (Srinivas Ramachandran)
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Contact
Active Motif on Twitter
Epigenetics Podcast on Twitter
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Email: podcast@activemotif.com
CUT&Tag and CUT&RUN: Redefining the Standards for ProteinβDNA Mapping in Epigenetics: https://epigenetics-podcast.micro.blog/2025/07/30/cuttag-and-cutrun-redefining-the.html
30.07.2025 10:03 β π 5 π 2 π¬ 0 π 0
In the most recent episode we talked with Dr. Joseph Ecker from the Salk Institute about his work on high-resolution genome-wide mapping technologies in Arabidopsis and the human brain. #podcast #chromatin #epigenetics
Listen here: activemotif.com/podcasts-jos...
28.07.2025 07:01 β π 6 π 0 π¬ 0 π 0
In this episode we talked with Dr. Joseph Ecker from the Salk Institute about his work on high-resolution genome-wide mapping technologies in Arabidopsis and the human brain. #podcast #chromatin #epigenetics
Listen here: activemotif.com/podcasts-jos...
25.07.2025 07:01 β π 19 π 10 π¬ 0 π 0
In the most recent episode we talked with @teichlab.bsky.social from @cam.ac.uk about the Human Cell Atlas. #podcast #epigenetics #chromatin #singlecell
Listen here: www.activemotif.com/podcasts-sar...
14.07.2025 07:01 β π 4 π 2 π¬ 0 π 0
In this episode we talked with @teichlab.bsky.social from @cam.ac.uk about the Human Cell Atlas. #podcast #epigenetics #chromatin #singlecell
Listen here: www.activemotif.com/podcasts-sar...
11.07.2025 07:01 β π 1 π 0 π¬ 0 π 0
In the most recent episode, Professor Asim Surani, shares how his extensive research has significantly advanced the understanding of how the mammalian germline is specified. #chromatin #podcast #epigenetics
Listen here: activemotif.com/podcasts-azi...
23.06.2025 07:02 β π 6 π 1 π¬ 0 π 0
In this episode, Professor Asim Surani, shares how his extensive research has significantly advanced the understanding of how the mammalian germline is specified. #chromatin #podcast #epigenetics
Listen here: activemotif.com/podcasts-azi...
20.06.2025 07:01 β π 4 π 0 π¬ 0 π 0
2/3 on the Epigenetics Podcast :)
17.06.2025 08:45 β π 0 π 0 π¬ 0 π 0
East coast chromatin mafia
@kjarmache.bsky.social
16.11.2024 22:37 β π 24 π 2 π¬ 3 π 1
π Despite failed experiments as a student, alumnus Professor Azim Surani has spent his entire career trying to understand early mammalian development.
π¬ This year marks the 40th anniversary of his discovery of genomic imprinting β the process that tags specific genes, turning
13.11.2024 09:39 β π 9 π 4 π¬ 0 π 0
In the most recent episode of the Epigenetics Podcast, Petra Hajkova from the @mrc-lms.bsky.social⬠discusses her research on mammalian development, focusing on DNA methylation, histone modifications and TET enzymes. #podcast #epigenetics
π§ Listen here: activemotif.com/podcasts-pet...
09.06.2025 07:01 β π 5 π 0 π¬ 0 π 0
In this episode of the Epigenetics Podcast, Petra Hajkova from the @mrc-lms.bsky.social⬠discusses her research on mammalian development, focusing on DNA methylation, histone modifications and TET enzymes. #podcast #epigenetics
π§ Listen here: activemotif.com/podcasts-pet...
06.06.2025 07:01 β π 13 π 4 π¬ 0 π 0
ποΈ Catch Ani Deshpande, PhD, in episode 151 of the @epigeneticspod.bsky.socialβ¬β¬ where he discusses his work on epigenetic regulation in #AML, and the use of #CRISPR and high throughput screens for drug discovery.
βΆοΈ YouTube: vist.ly/3n5jemi
α―€ Spotify: vist.ly/3n5jemj
29.05.2025 19:16 β π 0 π 3 π¬ 0 π 0
PhD at Harvard & LMU, studying #transcription | #BIF PhD Fellow | either shooting πΈ or pipetting π§ͺ𧬠| www.sophieroth.com
MD, PhD, Pulmonologist, #PulmonaryHypertension specialist @researchmar.bsky.social, registries&data, environmental activist. She/Her. I claim my opinions π
Also @LucillaPiccari@med-mastodon.com
How cells stick to things and move around, microscopy, cats, garden bugs, forays into machine learning, occasional political snark. Asst Prof University of Bath, UK π³οΈβπ
The ICR is making the discoveries that defeat cancer.
We're a top UK academic research centre, a postgrad college, and a charity.
π London (Chelsea and Sutton)
https://www.icr.ac.uk/
aka motoscientist. Lead of the Breast epigenetic plasticity and evolution at ICR. ER+ Breast Cancer all things considered. Old school midfielder. Early adopter of obsolete technologies. Views are my own. ORCID 0000-0002-7534-0785
Junior Group Leader, Center for Molecular Medicine Cologne, University of Cologne, DE
Join us as we discuss the latest stem cell research, policy, and news with field experts. Brought to you by @stemcell.com.
π stemcellpodcast.com
The Korb Lab works at the intersection of epigenetics and neuroscience at the University of Pennsylvania Perelman School of Medicine. Opinions are our own. http://korblab.com
Mancuso Lab at the VIB - Center for molecular Neurology. We study microglia in neurodegeneration.
https://mancusolab.sites.vib.be/en
Molecular Neurobiologist | @UMCG |
#microglia #multiplesclerosis #neurodegeneration #neurodevelopment | mum | πΎ tennisfan
Neuroscientist, focus on neuroinflammation and amyloid, @LMU_Muenchen, @DZNE_en, @LMU_BMC and @SyNergy_Cluster
www.neher-lab.de
Oncode Institute is an independent institute dedicated to understanding cancer and translating research into practice more efficiently. Learn more about Oncode Institute: https://oncodeinstitute.nl
Full professor at ETH ZΓΌrich, Stem Cell Biology and Ageing lab, D-HEST, passionate about hematopoietic stem cells, leukemia, ageing, single-cell, high altitude trekking :)
Enthusiastic Staff Scientist at the National Institutes of Health, focusing on CTCF and its paralog BORIS (CTCFL), unraveling how their interactions shape 3D genome organization during spermatogenesis and contribute to cancer development and progression.
Nucleic Acids Research (NAR), from Oxford University Press, publishes the results of leading-edge research into physical, chemical, biochemical and biological aspects of nucleic acids and proteins involved in nucleic acid metabolism and/or interactions
Assistant Professor @ Stanford University | cancer epigenetics | DNA replication | protein synthesis | vanrechemlab.com
Official account for the University of Cambridge. Follow us for research, news, events and student stories from the Cambridge community ππ